EM L1 Tastekin et al 2018 [Tastekin2018]

L1 EM reconstructed neurons from Tastekin et al 2018

Open EM L1 Tastekin et al 2018 in VFB

Example Images

EM L1 Tastekin et al 2018 EM L1 Tastekin et al 2018 EM L1 Tastekin et al 2018 EM L1 Tastekin et al 2018 EM L1 Tastekin et al 2018

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://virtualflybrain.org/reports/Tastekin2018",
            "symbol": "",
            "types": [
                "Entity",
                "DataSet",
                "Individual"
            ],
            "short_form": "Tastekin2018",
            "label": "EM L1 Tastekin et al 2018"
        },
        "link": "",
        "description": [
            "L1 EM reconstructed neurons from Tastekin et al 2018"
        ],
        "comment": []
    },
    "query": "Get JSON for DataSet",
    "version": "44725ae",
    "anatomy_channel_image": [
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_0010021z",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "Larva",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_0010021z",
                "label": "CN-27 (L1EM:12813847)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00050000",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00050000",
                        "types": [
                            "Entity",
                            "Anatomy",
                            "Individual",
                            "Larva",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/021z/VFB_00050000/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_0010021z",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_0010021z",
                    "label": "LH Processor_right 12813847_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_0010021v",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "Larva",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_0010021v",
                "label": "LH-LN2_left (L1EM:5769582)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00050000",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00050000",
                        "types": [
                            "Entity",
                            "Anatomy",
                            "Individual",
                            "Larva",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/021v/VFB_00050000/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_0010021v",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_0010021v",
                    "label": "LH-LN2_left 5769582_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_0010021u",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Cell",
                    "Cholinergic",
                    "Individual",
                    "Larva",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_0010021u",
                "label": "PDM-DN_right (L1EM:5462159)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00050000",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00050000",
                        "types": [
                            "Entity",
                            "Anatomy",
                            "Individual",
                            "Larva",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/021u/VFB_00050000/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_0010021u",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_0010021u",
                    "label": "PDM-DN_right 5462159_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_0010021x",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "Larva",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_0010021x",
                "label": "CN-29 (L1EM:8065771)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00050000",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00050000",
                        "types": [
                            "Entity",
                            "Anatomy",
                            "Individual",
                            "Larva",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/021x/VFB_00050000/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_0010021x",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_0010021x",
                    "label": "MJ: LNM_downstream4_right 8065771_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_0010022a",
                "types": [
                    "Entity",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "Larva",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_0010022a",
                "label": "CN-29 (L1EM:17038587)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00050000",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00050000",
                        "types": [
                            "Entity",
                            "Anatomy",
                            "Individual",
                            "Larva",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00050000",
                        "label": "L1 larval CNS ssTEM - Cardona/Janelia"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/022a/VFB_00050000/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_0010022a",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_0010022a",
                    "label": "MJ: LNM_downstream4_left 17038587_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        }
    ],
    "xrefs": [],
    "license": [
        {
            "core": {
                "symbol": "",
                "iri": null,
                "types": null,
                "short_form": null,
                "label": ""
            },
            "icon": "",
            "link": ""
        }
    ],
    "pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/FBrf0240828",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "FBrf0240828",
                "label": "Tastekin et al., 2018, eLife 7: e38740"
            },
            "FlyBase": "FBrf0240828",
            "PubMed": "30465650",
            "DOI": "10.7554/eLife.38740"
        }
    ],
    "dataset_counts": {
        "images": 10,
        "types": 4
    }
}