scaRNA [SO_0002095]

A ncRNA, specific to the Cajal body, that has been demonstrated to function as a guide RNA in the site-specific synthesis of 2’-O-ribose-methylated nucleotides and pseudouridines in the RNA polymerase II-transcribed U1, U2, U4 and U5 spliceosomal small nuclear RNAs (snRNAs). Moved from is_a ncRNA (SO:0000655) to is_a snoRNA (SO:0000275) as per request from FlyBase by Dave Sant 24 April 2021. See GitHub Issue #509.

Open scaRNA in VFB

VFB Term Json

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            "iri": "http://purl.obolibrary.org/obo/SO_0002095",
            "symbol": "",
            "types": [
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            "short_form": "SO_0002095",
            "label": "scaRNA"
        },
        "description": [
            "A ncRNA, specific to the Cajal body, that has been demonstrated to function as a guide RNA in the site-specific synthesis of 2'-O-ribose-methylated nucleotides and pseudouridines in the RNA polymerase II-transcribed U1, U2, U4 and U5 spliceosomal small nuclear RNAs (snRNAs)."
        ],
        "comment": [
            "Moved from is_a ncRNA (SO:0000655) to is_a snoRNA (SO:0000275) as per request from FlyBase by Dave Sant 24 April 2021. See GitHub Issue #509."
        ]
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/SO_0000275",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "SO_0000275",
            "label": "wiki"
        }
    ],
    "relationships": [],
    "xrefs": [],
    "anatomy_channel_image": [],
    "pub_syn": [
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "small Cajal body-specific RNA",
                "type": ""
            },
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                    "symbol": "",
                    "iri": "http://flybase.org/reports/Unattributed",
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                    ],
                    "short_form": "Unattributed",
                    "label": ""
                },
                "FlyBase": "",
                "PubMed": "",
                "DOI": ""
            }
        },
        {
            "synonym": {
                "scope": "has_exact_synonym",
                "label": "small Cajal body specific RNA",
                "type": ""
            },
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                    "label": ""
                },
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                "PubMed": "",
                "DOI": ""
            }
        }
    ],
    "def_pubs": [
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                "label": ""
            },
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            "PubMed": "",
            "DOI": ""
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    ]
}