VFB Content Report
VFB Content Report 2024-03-18
Report of content found at http://pdb.virtualflybrain.org
on Mon, 18 Mar 2024 00:44:43
Ontology Content
Anatomy | Classes | Publications |
---|---|---|
All Terms | 20111 | 1610 |
All Nervous System Parts | 13794 | 1128 |
All Neurons | 10092 | 839 |
Characterised Neurons | 6228 | 839 |
Provisional Neurons | 3864 | 10 |
All Nervous System Regions | 1428 | 253 |
Synaptic Neuropils | 624 | 141 |
Neuron Projection Bundles | 590 | 129 |
Cell Body Rinds | 132 | 8 |
Sense Organs | 852 | 156 |
104417 formal assertions, of which 31158 are SubClassOf assertions and 73259 are other relationship types
91566 formal assertions on nervous system components, of which 23549 are SubClassOf assertions and 68017 are other relationship types
Image Content
(excludes hemibrain v1.0.1)
155010 total images from 108 datasets
77282 single neuron images of 5929 cell types
43695 images of expression patterns of 16876 drivers
2737 images of expression patterns of 579 split combinations
49038 images of expression pattern fragments of 4601 drivers
Annotations
216386 annotations recording 4129 types of anatomical structure that 17882 specific driver lines are expressed in.
181935 annotations recording 3055 parts of the nervous system that 15217 specific driver lines are expressed in.
25778 annotations recording 2014 types of neuron that 5377 specific driver lines are expressed in.
6770 annotations recording 793 types of neuron that 1898 specific split combinations are expressed in.
Connectivity
Neuron | Number of Neurons | Input/Output Entity | Number of Entities | Connections |
---|---|---|---|---|
Any neuron (individuals) | 30777 | Any neuron (individuals) | 30777 | 3499052 |
Any neuron (individuals) | 22585 | Region (individuals) | 218 | 299683 |
Any neuron (classes) | 324 | Muscle (classes) | 227 | 248 |
Any neuron (classes) | 787 | Sense organ (classes) | 412 | 510 |
Content by Template
(excludes hemibrain v1.0.1)
Template Name | Datasets | Images | Single Neurons | EM Neurons | Full Expression Patterns | Split Expression Patterns | Partial Expression Patterns | Painted domains |
---|---|---|---|---|---|---|---|---|
Adult Head (McKellar2020) | 1 | 18 | 0 | 0 | 0 | 0 | 0 | 0 |
adult VNS template - Court2018 | 10 | 3217 | 1 | 0 | 3193 | 494 | 0 | 22 |
JRC_FlyEM_Hemibrain | 2 | 22701 | 22588 | 22587 | 0 | 0 | 0 | 114 |
JRC2018Unisex | 67 | 100516 | 45853 | 29074 | 31655 | 1632 | 38796 | 46 |
L1 larval CNS ssTEM - Cardona/Janelia | 24 | 5019 | 5019 | 5019 | 0 | 0 | 0 | 0 |
JRC2018UnisexVNC | 22 | 44363 | 25789 | 2029 | 8314 | 625 | 10240 | 23780 |
adult brain template Ito2014 | 1 | 75 | 1 | 0 | 0 | 0 | 0 | 75 |
L3 CNS template - Wood2018 | 2 | 257 | 2 | 0 | 0 | 0 | 2 | 255 |
Adult T1 Leg (Kuan2020) | 2 | 678 | 464 | 0 | 0 | 0 | 0 | 4 |
adult brain template JFRC2 | 21 | 41940 | 16299 | 0 | 25272 | 600 | 16127 | 58 |
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